| PhyloMap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza A virus genome | |
Zhang, Jiajie1,2,3; Mamlouk, Amir Madany2,3; Martinetz, Thomas2,3; Chang, Suhua4 ; Wang, Jing4; Hilgenfeld, Rolf1,2,5,6; Hilgenfeld, R (reprint author), Med Univ Lubeck, Ctr Struct & Cell Biol Med, Inst Biochem, Ratzeburger Allee 160, D-23538 Lubeck, Germany.
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| 心理所单位排序 | 4 |
| 摘要 | Background: Results of phylogenetic analysis are often visualized as phylogenetic trees. Such a tree can typically only include up to a few hundred sequences. When more than a few thousand sequences are to be included, analyzing the phylogenetic relationships among them becomes a challenging task. The recent frequent outbreaks of influenza A viruses have resulted in the rapid accumulation of corresponding genome sequences. Currently, there are more than 7500 influenza A virus genomes in the database. There are no efficient ways of representing this huge data set as a whole, thus preventing a further understanding of the diversity of the influenza A virus genome. |
| 学科领域 | Psychology Research Method,Medical Psychology |
| 2011-06-20 | |
| 语种 | 英语 |
| 发表期刊 | BMC BIOINFORMATICS
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| ISSN | 1471-2105 |
| 卷号 | 12期号:1页码:248 |
| 期刊论文类型 | Article |
| URL | 查看原文 |
| 收录类别 | SCI |
| 项目简介 | We acknowledge support by the Graduate School for Computing in Medicine and Life Sciences, University of Lubeck.Funding: Germany's Excellence Initiative [DFG GSC 235/1]; International Consortium on Antivirals (http://www.icav-citav.ca). RH is supported by a Chinese Academy of Sciences Visiting Professorship for Senior International Scientists, grant no. 2010T1S6, and by the Fonds der Chemischen Industrie. |
| WOS记录号 | WOS:000293082700001 |
| 资助机构 | Graduate School for Computing in Medicine and Life Sciences, University of Lubeck ; Germany's Excellence Initiative [DFG] [GSC 235/1] ; International Consortium on Antivirals ; Chinese Academy of Sciences [2010T1S6] ; Fonds der Chemischen Industrie |
| 引用统计 | |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.psych.ac.cn/handle/311026/12895 |
| 专题 | 健康与遗传心理学研究室 |
| 通讯作者 | Hilgenfeld, R (reprint author), Med Univ Lubeck, Ctr Struct & Cell Biol Med, Inst Biochem, Ratzeburger Allee 160, D-23538 Lubeck, Germany. |
| 作者单位 | 1.Med Univ Lubeck, Ctr Struct & Cell Biol Med, Inst Biochem, D-23538 Lubeck, Germany 2.Med Univ Lubeck, Grad Sch Comp Med & Life Sci, D-23538 Lubeck, Germany 3.Med Univ Lubeck, Inst Neuro & Bioinformat, D-23538 Lubeck, Germany 4.Chinese Acad Sci, Inst Psychol, Key Lab Mental Hlth, Beijing 100101, Peoples R China 5.DESY, Lab Struct Biol Infect & Inflammat, D-22603 Hamburg, Germany 6.Chinese Acad Sci, Shanghai Inst Mat Med, Shanghai 201203, Peoples R China |
| 推荐引用方式 GB/T 7714 | Zhang, Jiajie,Mamlouk, Amir Madany,Martinetz, Thomas,et al. PhyloMap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza A virus genome[J]. BMC BIOINFORMATICS,2011,12(1):248. |
| APA | Zhang, Jiajie.,Mamlouk, Amir Madany.,Martinetz, Thomas.,Chang, Suhua.,Wang, Jing.,...&Hilgenfeld, R .(2011).PhyloMap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza A virus genome.BMC BIOINFORMATICS,12(1),248. |
| MLA | Zhang, Jiajie,et al."PhyloMap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza A virus genome".BMC BIOINFORMATICS 12.1(2011):248. |
| 条目包含的文件 | ||||||
| 文件名称/大小 | 文献类型 | 版本类型 | 开放类型 | 使用许可 | ||
| WOS_000293082700001.（11600KB） | 期刊论文 | 出版稿 | 限制开放 | CC BY-NC-SA | 请求全文 | |
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