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Multilocus association analysis under polygenic models | |
Ott, Jurg1; Sun, Dandan2 | |
摘要 | For each variant in a genome-wide association study, the risk allele is the one with an odds ratio greater than 1. For a given set of variants, the number of risk alleles in cases minus that in controls is evaluated and a p-value is obtained for this difference. Successive sums of these differences over the best 2, 3, etc. variants and associated p-values are obtained. The smallest such p-value is our genome-wide test statistic, for which an empirical significance level is obtained by permutation analysis. Applied to disease datasets, our approach furnishes significant results even with little single-locus effects. |
关键词 | polygenic trait emergenesis emergenic trait epistatic interaction schizophrenia |
2012 | |
语种 | 英语 |
发表期刊 | INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS |
ISSN | 1748-5673 |
卷号 | 6期号:5页码:482-489 |
期刊论文类型 | Article |
收录类别 | SCI |
WOS记录号 | WOS:000309610700003 |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://ir.psych.ac.cn/handle/311026/13424 |
专题 | 中国科学院心理健康重点实验室 |
作者单位 | 1.Chinese Acad Sci, Inst Psychol, Key Lab Mental Hlth, Beijing 100101, Peoples R China 2.Chinese Acad Sci, Beijing Inst Genom, Beijing 100029, Peoples R China |
第一作者单位 | 中国科学院心理健康重点实验室 |
推荐引用方式 GB/T 7714 | Ott, Jurg,Sun, Dandan. Multilocus association analysis under polygenic models[J]. INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS,2012,6(5):482-489. |
APA | Ott, Jurg,&Sun, Dandan.(2012).Multilocus association analysis under polygenic models.INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS,6(5),482-489. |
MLA | Ott, Jurg,et al."Multilocus association analysis under polygenic models".INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS 6.5(2012):482-489. |
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