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NeoAnalysis: a Python-based toolbox for quick electrophysiological data processing and analysis
Zhang, Bo1,2; Dai, Ji1,2,3,4; Zhang, Tao1,2
2017-11-13
Source PublicationBIOMEDICAL ENGINEERING ONLINE
ISSN1475-925X
SubtypeArticle
Volume16Issue:0Pages:1-19
Abstract

Background: In a typical electrophysiological experiment, especially one that includes studying animal behavior, the data collected normally contain spikes, local field potentials, behavioral responses and other associated data. In order to obtain informative results, the data must be analyzed simultaneously with the experimental settings. However, most open-source toolboxes currently available for data analysis were developed to handle only a portion of the data and did not take into account the sorting of experimental conditions. Additionally, these toolboxes require that the input data be in a specific format, which can be inconvenient to users. Therefore, the development of a highly integrated toolbox that can process multiple types of data regardless of input data format and perform basic analysis for general electrophysiological experiments is incredibly useful.

KeywordNeoAnalysis Python Electrophysiology Analysis Toolbox Spike Offline sorting Saccade detection
DOI10.1186/s12938-017-0419-7
Indexed BySCI
Language英语
Funding OrganizationNational Natural Science Foundation of China(31271175 ; Scientific Foundation of Institute of Psychology, Chinese Academy of Sciences(Y5CX112005) ; Youth Innovation Promotion Association CAS(2017120) ; 31600870)
WOS Research AreaEngineering
WOS SubjectEngineering, Biomedical
WOS IDWOS:000415146900002
WOS HeadingsScience & Technology ; Technology
Citation statistics
Document Type期刊论文
Identifierhttp://ir.psych.ac.cn/handle/311026/22021
Collection脑与认知科学国家重点实验室
Affiliation1.Chinese Acad Sci, Inst Psychol, State Key Lab Brain & Cognit Sci, Beijing 100101, Peoples R China
2.Univ Chinese Acad Sci, Dept Psychol, Beijing 100049, Peoples R China
3.Chinese Acad Sci, Shenzhen Key Lab Neuropsychiat Modulat, Shenzhen 518055, Peoples R China
4.Chinese Acad Sci, Collaborat Innovat Ctr Brain Sci, CAS Ctr Excellence Brain Sci & Intelligence Techn, BCBDI,Shenzhen Inst Adv Technol, Shenzhen 518055, Peoples R China
Recommended Citation
GB/T 7714
Zhang, Bo,Dai, Ji,Zhang, Tao. NeoAnalysis: a Python-based toolbox for quick electrophysiological data processing and analysis[J]. BIOMEDICAL ENGINEERING ONLINE,2017,16(0):1-19.
APA Zhang, Bo,Dai, Ji,&Zhang, Tao.(2017).NeoAnalysis: a Python-based toolbox for quick electrophysiological data processing and analysis.BIOMEDICAL ENGINEERING ONLINE,16(0),1-19.
MLA Zhang, Bo,et al."NeoAnalysis: a Python-based toolbox for quick electrophysiological data processing and analysis".BIOMEDICAL ENGINEERING ONLINE 16.0(2017):1-19.
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