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Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers (vol 8, 219, 2021) | |
Cohen-Adad, Julien1,2,3; Alonso-Ortiz, Eva1; Abramovic, Mihael4; Arneitz, Carina4; Atcheson, Nicole5; Barlow, Laura6; Barry, Robert L.7,8,9; Barth, Markus10; Battiston, Marco11; Buchel, Christian12; Budde, Matthew13; Callot, Virginie14,15; Combes, Anna J. E.16; De Leener, Benjamin17,18; Descoteaux, Maxime19,20; de Sousa, Paulo Loureiro21; Dostal, Marek22; Doyon, Julien23; Dvorak, Adam24; Eippert, Falk25; Epperson, Karla R.26; Epperson, Kevin S.26; Freund, Patrick27; Finsterbusch, Jurgen12; Foias, Alexandru1; Fratini, Michela28,29; Fukunaga, Issei30; Gandini Wheeler-Kingshott, Claudia A. M.11,31,32; Germani, Giancarlo32; Gilbert, Guillaume33; Giove, Federico29,34; Gros, Charley1,5; Grussu, Francesco11,35; Hagiwara, Akifumi30; Henry, Pierre-Gilles36; Horak, Tomas37; Hori, Masaaki38; Joers, James36; Kamiya, Kouhei39; Karbasforoushan, Haleh40,41; Kerkovsky, Milos22; Khatibi, Ali23,42; Kim, Joo-Won43; Kinany, Nawal44,45; Kitzler, Hagen H.46; Kolind, Shannon6,24,47; Kong, Yazhuo48,49,50; Kudlicka, Petr37; Kuntke, Paul46; Kurniawan, Nyoman D.5; Kusmia, Slawomir51,52,53; Labounek, Rene54,55; Lagana, Maria Marcella56; Laule, Cornelia57; Law, Christine S.58; Lenglet, Christophe36; Leutritz, Tobias59; Liu, Yaou60,61; Llufriu, Sara62; Mackey, Sean58; Martinez-Heras, Eloy62; Mattera, Loan63; Nestrasil, Igor36,54; O'Grady, Kristin P.16,64; Papinutto, Nico65; Papp, Daniel1,50; Pareto, Deborah66; Parrish, Todd B.40; Pichiecchio, Anna31,32; Prados, Ferran11,52,67; Rovira, Alex66; Ruitenberg, Marc J.68; Samson, Rebecca S.11; Savini, Giovanni32; Seif, Maryam27,59; Seifert, Alan C.43; Smith, Alex K.50; Smith, Seth A.16,64; Smith, Zachary A.69; Solana, Elisabeth62; Suzuki, Y.39; Tackley, George51; Tinnermann, Alexandra12; Valosek, Jan70; Van de Ville, Dimitri44,45; Yiannakas, Marios C.11; Weber, Kenneth A., II58; Weiskopf, Nikolaus59,71; Wise, Richard G.51,72; Wyss, Patrik O.4; Xu, Junqian43 | |
第一作者 | Julien Cohen-Adad |
通讯作者邮箱 | jcohen@polymtl.ca |
摘要 | In a companion paper by Cohen-Adad et al. we introduce the spine generic quantitative MRI protocol that provides valuable metrics for assessing spinal cord macrostructural and microstructural integrity. This protocol was used to acquire a single subject dataset across 19 centers and a multi-subject dataset across 42 centers (for a total of 260 participants), spanning the three main MRI manufacturers: GE, Philips and Siemens. Both datasets are publicly available via git-annex. Data were analysed using the Spinal Cord Toolbox to produce normative values as well as inter/intra-site and inter/intra-manufacturer statistics. Reproducibility for the spine generic protocol was high across sites and manufacturers, with an average inter-site coefficient of variation of less than 5% for all the metrics. Full documentation and results can be found at https://spine-generic.rtfd.io/ . The datasets and analysis pipeline will help pave the way towards accessible and reproducible quantitative MRI in the spinal cord. |
2021-09-10 | |
语种 | 英语 |
DOI | 10.1038/s41597-021-01026-2 |
发表期刊 | SCIENTIFIC DATA |
卷号 | 8期号:1页码:1 |
期刊论文类型 | 实证研究 |
收录类别 | SCI |
出版者 | NATURE PORTFOLIO |
WOS研究方向 | Science & Technology - Other Topics |
WOS类目 | Multidisciplinary Sciences |
WOS记录号 | WOS:000694838900001 |
WOS分区 | Q1 |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://ir.psych.ac.cn/handle/311026/40276 |
专题 | 中国科学院行为科学重点实验室 |
作者单位 | 1.Inst BioMed Engn, NeuroPoly Lab, PolyTech Montreal, Montreal, PQ, Canada 2.Univ Montreal, Funct Neuroimaging Unit, CRIUGM, Montreal, PQ, Canada 3.Quebec Inst, Montreal, PQ, Canada 4.Swiss Parapleg Centre, Dept Radiol, Nottwil, Switzerland 5.Univ Queensland, Centre Adv Imaging, Brisbane, Australia 6.Univ British Columbia, Dept Radiol, Vancouver, BC, Canada 7.Massachusetts Gen Hosp, Martinos Ctr BioMed Imaging, Dept Radiol, Athinoula, Charlestown, MA USA 8.Harvard Med Sch, Dept Radiol, Boston, MA USA 9.Massachusetts Inst Technol Hlth Sciences & Techno, Cambridge, MA USA 10.Univ Queensland, Sch Informat Technol & Elect Engn, Brisbane, Australia 11.UCL, UCL Queen Sq Inst Neurology,Fac Brain Sciences, Queen Sq MS Centre,NMR Res Unit, London, England 12.Univ Med Ctr Hamburg, Dept Syst Neuroscience, Eppendorf, Hamburg, Germany 13.Med Coll Wisconsin, Dept Neurosurgery, Milwaukee, WI USA 14.Marseille Univ, CNRS, CRMBM, Marseille, France 15.Hop Univ Timone, APHM, CEMEREM, Marseille, France 16.Vanderbilt Univ Inst Imaging Sci, Vanderbilt Univ Med Ctr, Nashville, TN USA 17.Dept Comp & Software Engn, PolyTech Montreal, Montreal, PQ, Canada 18.Justine Res Centre, CHU Sainte, Montreal, QC, Canada 19.Centre Rech CHUS, CIMS, Sherbrooke, Canada 20.Univ Sherbrooke, Comp Sci Dept, Sherbrooke Connect Imaging Lab, SCIL, Sherbrooke, Canada 21.Univ Strasbourg, CNRS, ICube, Strasbourg, France 22.Univ Hosp Brno, Masaryk Univ,Dept Radiol,UHB,Nucl Med, Brno, Czech Republic 23.McGill Univ, Montreal Neurol Inst, McConnell Brain Imaging Centre, Montreal, QC, Canada 24.Univ British Columbia, Dept Phys & Astronomy, Vancouver, BC, Canada 25.Max Planck Inst Human Cognit & Brain Sciences, Leipzig, Germany 26.Stanford Univ Sch Med, Lucas Ctr, Richard M, Stanford, CA USA 27.Univ Zurich, Spinal Cord Injury Ctr Balgrist, Zurich, Switzerland 28.Inst Nanotechnol, CNR, Rome, Italy 29.IRCCS Santa Lucia Fdn, Rome, Italy 30.Juntendo Univ Sch Med, Dept Radiol, Tokyo, Tokyo, Japan 31.Univ Pavia, Dept Brain & Behav Sciences, Pavia, Italy 32.IRCCS Mondino Fdn, Brain MRI 3T Res Centre, Pavia, Italy 33.MR Clin Sci, Philips Healthcare, Markham, ON, Canada 34.Museo stor Fis Centro studi Ric Enr Fermi, CREF, Rome, Italy 35.Vall d'Hebron Barcelona Hosp Campus, Vall d'Hebron Inst Oncology, Radi Grp, Barcelona, Spain 36.Univ Minnesota, Ctr Magnet Resonance Res, Dept Radiol, Minneapolis, MN USA 37.Cent European Inst Technol, Multimodal & funct imaging Lab, CEITEC, Brno, Czech Republic 38.Toho Univ Omori Med Ctr, Dept Radiol, Tokyo, Tokyo, Japan 39.Univ Tokyo, Dept Radiol, Tokyo, Tokyo, Japan 40.Northwestern Univ, Feinberg Sch Med, InterDept Neuroscience Program, Chicago, IL USA 41.Stanford Univ, Sch Med, Dept Psychiat & Behav Sciences, Stanford, CA USA 42.Univ Birmingham, Coll Life & Environm Sciences, Centre Precision Rehabil Spinal Pain,Sch Sport, CPR Spine,Exercise & Rehabil Sciences,Edgbaston, Birmingham, England 43.BioMed Engn & Imaging Inst, Icahn Sch Med Mt Sinai, Dept Radiol, BMEII, New York, NY USA 44.Inst BioEngn, Ctr Neuroprosthet, Ecole PolyTech Federale Lausanne, Geneva, Switzerland 45.Univ Geneva, Dept Radiol & Med Informat, Geneva, Switzerland 46.Carl Gustav Carus Univ Hosp, Inst Diagnost & Intervent Neuroradiol, Syst Univers Dresden, Dresden, Germany 47.Univ British Columbia, Dept Med, Neurology, Vancouver, BC, Canada 48.Inst Psychol, Chinese Acad Sciences, CAS Key Lab Behav Sci, Beijing, Beijing, Peoples R China 49.Univ Chinese Acad Sciences, Dept Psychol, Beijing, Beijing, Peoples R China 50.Univ Oxford, Wellcome Centre Integrative Neuroimaging, Nuffield Dept Clinical Neurosciences, FMRIB, Oxford, England 51.Cardiff Univ, CUBRIC, Wales, England 52.UCL, Centre Med Image Comp, Med Phys & BioMed Engn Dept, CMIC, London, England 53.Epilepsy Soc MRI Unit, Chalfont St Peter, Gerrards Cross, England 54.Univ Minnesota, Dept Pediat, Div Clin Behav Neuroscience, Minneapolis, MN USA 55.Univ Hosp Olomouc, Departments Neurol & BioMed Engn, Olomouc, Czech Republic 56.IRCCS Fondaz Don Carlo Gnocchi ONLUS, Milan, Italy 57.Univ British Columbia, Pathol & Lab Med,Departments Radiol, Phys & Astronomy, Int Collaborat Repair Discoveries,ICORD, Vancouver, BC, Canada 58.Stanford Univ Sch Med, Dept Anesthesiol, Div Pain Med, Perioperat & Pain Med, Stanford, CA USA 59.Max Planck Inst Human Cognit & Brain Sciences, Dept Neurophys, Leipzig, Germany 60.Capital Med Univ, Beijing Tiantan Hosp, Dept Radiol, Beijing, Beijing, Peoples R China 61.Tiantan Image Res Ctr, China Natl Clin Res Ctr Neurol Dis, Beijing, Beijing, Peoples R China 62.& Universitat Barcelona, Hosp Clin Barcelona, Institut d'Investigac Biomediques August Pi Sunye, Ctr Neuroimmunol,Lab Adv Imaging Neuroimmunol Dis, Barcelona, Spain 63.Fondat Campus Biotech Geneve, 1202 Geneva, Switzerland 64.Vanderbilt Univ Sch Med, Dept Radiol, Nashville, TN USA 65.Univ Calif San Francisco, UCSF Weill Inst Neurosciences, Dept Neurol, San Francisco, CA USA 66.Vall d'Hebron Univ Hosp, Neuroradiol Sect, Barcelona, Spain 67.Universitat Oberta Catalunya, Ehealth Centre, Barcelona, Spain 68.Univ Queensland, Fac Med, Sch BioMed Sciences, Brisbane, Australia 69.Univ Oklahoma Hlth Sciences Ctr, Oklahoma City, OK USA 70.Palacky Univ, Univ Hosp Olomouc, Fac Med & Dent, Dept Neurol, Olomouc, Czech Republic 71.Univ Leipzig, Felix Bloch Inst Solid State Phys, Fac Phys & Earth Sciences, Leipzig, Germany 72.D'Annunzio University Chieti, Inst Adv BioMed Technol,Dept Neuroscience, Imaging & Clin Sciences,G, Chieti-pescara, Italy |
推荐引用方式 GB/T 7714 | Cohen-Adad, Julien,Alonso-Ortiz, Eva,Abramovic, Mihael,et al. Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers (vol 8, 219, 2021)[J]. SCIENTIFIC DATA,2021,8(1):1. |
APA | Cohen-Adad, Julien.,Alonso-Ortiz, Eva.,Abramovic, Mihael.,Arneitz, Carina.,Atcheson, Nicole.,...&Xu, Junqian.(2021).Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers (vol 8, 219, 2021).SCIENTIFIC DATA,8(1),1. |
MLA | Cohen-Adad, Julien,et al."Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers (vol 8, 219, 2021)".SCIENTIFIC DATA 8.1(2021):1. |
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