Institutional Repository of Key Laboratory of Mental Health, CAS
MRIES: A Matlab Toolbox for Mapping the Responses to Intracranial Electrical Stimulation | |
Kaijia Sun1,2; Haixiang Wang3; Yunxian Bai2; Wenjing Zhou3; Liang Wang2,4![]() | |
第一作者 | Kaijia Sun |
通讯作者邮箱 | lwang@psych.ac.cn (liang wang) |
心理所单位排序 | 2 |
摘要 | Propose Directed cortical responses to intracranial electrical stimulation are a good standard for mapping inter-regional direct connectivity. Cortico-cortical evoked potential (CCEP), elicited by single pulse electrical stimulation (SPES), has been widely used to map the normal and abnormal brain effective network. However, automated processing of CCEP datasets and visualization of connectivity results remain challenging for researchers and clinicians. In this study, we develop a Matlab toolbox named MRIES (Mapping the Responses to Intracranial Electrical Stimulation) to automatically process CCEP data and visualize the connectivity results. Method The MRIES integrates the processing pipeline of the CCEP datasets and various methods for connectivity calculation based on low- and high-frequency signals with stimulation artifacts removed. The connectivity matrices are saved in different folders for visualization. Different visualization patterns (connectivity matrix, circle map, surface map, and volume map) are also integrated to the graphical user interface (GUI), which makes it easy to intuitively display and compare different connectivity measurements. Furthermore, one sample CCEP data set collected from eight epilepsy patients is used to validate the MRIES toolbox. Result We show the GUI and visualization functions of MRIES using one example CCEP data that has been described in a complete tutorial. We applied this toolbox to the sample CCEP data set to investigate the direct connectivity between the medial temporal lobe and the insular cortex. We find bidirectional connectivity between MTL and insular that are consistent with the findings of previous studies. Conclusion MRIES has a friendly GUI and integrates the full processing pipeline of CCEP data and various visualization methods. The MRIES toolbox, tutorial, and example data can be freely downloaded. As an open-source package, MRIES is expected to improve the reproducibility of CCEP findings and facilitate clinical translation. |
关键词 | electrical stimulation cortico-cortical evoked potential Epilepsy SEEG functional connectivity |
2021 | |
DOI | 10.3389/fnins.2021.652841 |
发表期刊 | FRONTIERS IN NEUROSCIENCE
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卷号 | 15页码:11 |
期刊论文类型 | 实证研究 |
收录类别 | SCI |
WOS分区 | Q2 |
Q分类 | Q2 |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | https://ir.psych.ac.cn/handle/311026/42584 |
专题 | 中国科学院心理健康重点实验室 |
通讯作者 | Liang Wang |
作者单位 | 1.School of Systems Science, Beijing Normal University, Beijing, China 2.CAS Key Laboratory of Mental Health, Institute of Psychology, Beijing, China 3.Epilepsy Center, Tsinghua University Yuquan Hospital, Beijing, China 4.Department of Psychology, University of Chinese Academy of Sciences, Beijing, China |
第一作者单位 | 中国科学院心理健康重点实验室 |
通讯作者单位 | 中国科学院心理健康重点实验室 |
推荐引用方式 GB/T 7714 | Kaijia Sun,Haixiang Wang,Yunxian Bai,et al. MRIES: A Matlab Toolbox for Mapping the Responses to Intracranial Electrical Stimulation[J]. FRONTIERS IN NEUROSCIENCE,2021,15:11. |
APA | Kaijia Sun,Haixiang Wang,Yunxian Bai,Wenjing Zhou,&Liang Wang.(2021).MRIES: A Matlab Toolbox for Mapping the Responses to Intracranial Electrical Stimulation.FRONTIERS IN NEUROSCIENCE,15,11. |
MLA | Kaijia Sun,et al."MRIES: A Matlab Toolbox for Mapping the Responses to Intracranial Electrical Stimulation".FRONTIERS IN NEUROSCIENCE 15(2021):11. |
条目包含的文件 | ||||||
文件名称/大小 | 文献类型 | 版本类型 | 开放类型 | 使用许可 | ||
MRIES_ A Matlab Tool(4189KB) | 期刊论文 | 作者接受稿 | 开放获取 | CC BY-NC-SA | 浏览 下载 |
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