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基于中脑类器官模型的 I 型双相情感障碍的病理机理研究
其他题名Investigating the iPSC-derived midbrain organoids of type I bipolar disorder
李丹
导师赵媚
2022-06
摘要背景:I 型双相情感障碍(type I bipolar disorder, BDI)是一种慢性的、复杂的精神疾病,发病率高达 0.6-1.0%,以重性躁狂,伴有或不伴有抑郁发作为主要特征。尽管锂治疗对多数 BD 患者疗效较好,仍然有约 30-40%的患者锂治疗无效。单细胞转录组测序技术的发展使识别细胞类型特异性的病理生理学成为可能。由于分析人脑的方法上的困难,诱导分化人多潜能干细胞(induced pluripotent stem ells,iPSCs)来源的大脑类器官因其具有丰富的细胞类型、组织架构以及可再现细胞与细胞之间的相互作用力和信号转导等优势,已成为疾病研究的发展趋势。 从患者的 iPSCs 分化而来的脑类器官是研究疾病病理生理过程的有力途径。目的:利用体外构建 BDI 患者来源的中脑类器官疾病模型,通过总转录组测序及单细胞转录组测序技术探究 BDI 疾病发病的中脑机制以及造成锂反应性差异的机制。 方法:1)将 BDI 病人和健康人源 iPSC 分化为中脑类器官,依次在分化过程 中 加 入 TGFβ 信 号 通 路 抑 制 剂 ( SB431542 )、 BMP 信 号 通 路 抑 制 剂(LDN193189)、SHH 信号通路激活剂(SHH 和 FGF8)、WNT 信号通路激活剂(CHIR99021)诱导神经底板层的形成及神经发生,最后加入 TGFβ、cAMP、BDNF、GDNF 等神经营养因子促进多巴胺神经元的分化成熟以及中脑类器官的成熟。2)对诱导分化成熟的人源中脑类器官进行转录组测序。3)对诱导分化成熟的人源中脑类器官进行单细胞转录组测序分析其细胞类型比例变化、细胞周期评估。 结果:1)总转录组测序分析发现 BDI 病人和健康人源中脑类器官表达差异显著,锂治疗有效(Lithium response,LR)组与健康人 HC 组共有 1615 个差异表达基因。锂治疗无效(Lithium nonresponse,NR)组与 HC 组共有 2969 个差异表达基因。LR 组与 NR 组共有 2859 个差异表达基因。2)总转录组显示 LR与 HC 组相比其神经突触通路、钙信号通路、神经活性配体-受体相互作用通路等显著失调。NR 组与 HC 组相比其甘油磷脂代谢通路、类固醇生物合成通路、氨基糖和核苷酸糖代谢通路等显著失调。3)经过质控后获取到共 28389 个细胞进行单细胞下游分析,通过标记基因鉴定共得到 7 种细胞类型,分别是:多巴胺能神经元、星形胶质细胞、少突胶质细胞、神经祖细胞、少突胶质祖细胞、放射状胶质细胞以及内皮细胞。4)BDI 患者来源的中脑类器官神经元比例显著升高,神经胶质细胞比例显著降低,其中 DA 神经元比例显著升高,少突胶质细胞比例显著下调,星形胶质细胞比例上调。5)PLD3 在 BDI 患者来源的中脑类器官 DA神经元和星形胶质细胞中的表达下调,NR 组下调最显著。 结论:1)成功在体外构建了 BDI 型中脑类器官疾病模型。2)BDI 患者与健康人的基因表达差异显著,且 LR 与 NR 组的总转录组同样具有显著差异。差异基因富集到多个神经突触相关通路、钙信号传导、昼夜节律、cAMP 信号通路、糖代谢、脂代谢及氨基酸代谢相关通路。锂治疗主要通过调节神经突触相关通路、钙信号传导和昼夜节律起作用。3)BDI 患者细胞增殖受阻,加速细胞分化为 DA神经元,从而引起躁狂的行为表征。4)少突胶质细胞数量降低可能是引起 BD的发病机制之一。5)PLD3 的失调可能是锂不反应的原因之一。
其他摘要Background: Type-I bipolar disorder (BDI) is a chronic, complex psychiatric disorder with an incidence of ~0.6-1.0%, and is characterized by severe mania with or without depressive onset. Although the lithium therapy is effective for a majority of patients with BDI, however, approximately 30-40% of patients fail to show positive response to lithium. The development of single-cell RNA sequencing (scRNAseq) technique has made it possible to identify cell type-specific pathophysiological changes of diseases. Due to the difficulties in directly analyzing the human brain, brain organoids derived from induced pluripotent stem cells (iPSCs) of patients have been applied to disease research. Due to their merits of enriched cell types, organizational structure, and reproducible cell-to-cell interaction and signal transduction, brain organoids differentiated from patient iPSCs provide a powerful tool for the investigation of the pathophysiology of diseases. Objective: To explore the mid-brain pathogenic mechanisms of BDI and mechanisms of lithium response difference by constructing the patient iPSC-derived midbrain organoid disease model and performing RNAseq and scRNAseq analyses. Methods: 1) Differentiation of BDI patients and health people derived iPSCs into midbrain organoids by adding the TGFβ signaling pathway inhibitor SB431542, the BMP signaling pathway inhibitor LDN193189, the SHH signaling pathway activators SHH and FGF8, and the WNT signaling pathway activator CHIR99021, to induce the formation of the neural floor plate and neurogenesis, and finally adding TGFβ, cAMP, BDNF and GDNF to promote the maturation of dopaminergic neurons and the midbrain organoids. 2) RNAseq and single-cell RNAseq analyses of human midbrain organoids to assess the proportion of cell types and the cell cycle. Results: 1) The total transcriptome analysis revealed that there were significant differences between the midbrain organoids of patients and healthy controls, and there were 1615 differentially expressed genes (DEG) between the lithium responsive (LR) roup and the healthy human (HC) group. The lithium non-responsive (NR) group had a total of 2969 DEGs compared to the HC group. There were a total of 2859 DEGs between the LR group and the NR group. 2) The total transcriptome analysis revealed that compared to the HC group, the LR group showed a significant dysfunction in the synaptic pathway, the calcium signaling pathway and the neuroactive ligand-receptor interaction pathway, and the NR group showed a significant dysfunction in the glycerol phospholipid metabolic pathway, the steroid biosynthetic pathway and the amino sugar and nucleotide glucose metabolic pathway. 3) A total of 28389 cells were obtained for single-cell downstream analysis after quality control, and were classified into seven cell types, including dopaminergic neurons, astrocytes, oligodendrocytes, neural progenitor cells, oligodendrocyte progenitor cells, radial glial cells and endothelial cells. 4) In BDI patient iPSC-derived midbrain organoids, the number of neurons especially the dopaminergic neurons were significantly increased, the number of glial cells especially the oligodendrocytes were significantly decreased and the number of astrocytes was increased. 5) The expression of PLD3 were downregulated in the dopaminergic neurons and astrocytes of BDI patient iPSC-derived midbrain organoids, especially in the NR group. Conclusion: 1) BDI midbrain organoids disease models were successfully constructed. 2) The gene expression differed significantly between the midbrain organoids of the BDI patients and healthy control, and the total transcriptome of the LR and Multiple synaptic-related pathways, calcium Signaling pathway, circadian entertainment, cAMP signaling pathway, glucose metabolism, lipid metabolism and amino acid metabolism-related pathways. Lithium therapy mainly works by regulating synaptic related pathways, calcium signaling and circadian rhythm. 3) In the BDI patient organoids, blocked cell proliferation promoted iPSCs differentiation into DA neurons, which might represent a manic behavioral characterization. 4) The decrease of oligodendrocyte number may be one of the pathogeneses of BDI. 5) The downregulation of PLD3 expression may be one of the reasons for lithium nonresponse.
关键词双相情感障碍 多能干细胞 脑类器官 单细胞转录组测序
学位类型硕士
语种中文
学位名称理学硕士
学位专业健康心理学
学位授予单位中国科学院大学
学位授予地点中国科学院心理研究所
文献类型学位论文
条目标识符http://ir.psych.ac.cn/handle/311026/43123
专题健康与遗传心理学研究室
推荐引用方式
GB/T 7714
李丹. 基于中脑类器官模型的 I 型双相情感障碍的病理机理研究[D]. 中国科学院心理研究所. 中国科学院大学,2022.
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